Insertion junction: LMJ.RY0402.137409_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.137409
Chromosome:chromosome 17
Location:3290316
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g723100 (1 of 10) PTHR31867:SF1 - EXPANSIN-A1-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGCTAATCAAGCGCCCAGACCGGATGCT
Internal bar code:CTGGCGCCTCGACACACCTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1046
LEAP-Seq percent confirming:99.3065
LEAP-Seq n confirming:7017
LEAP-Seq n nonconfirming:49
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAATAAGGAGAGCGCAAC
Suggested primer 2:TAGCTCAAACGTTGTGCCTG