Insertion junction: LMJ.RY0402.137500_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.137500
Chromosome:chromosome_17
Location:3896938
Confidence (%):73
Locus systematic id Locus common name Defline Orientation Feature
Cre17.g728300 FAP226,CAL6 Calpain cysteine protease and Flagellar Associated Protein sense intron

Insertion site details

Flanking sequence (orientation from cassette outwards):GGCACCAAAACGTACTCCAGCAGCGCTAGC
Internal bar code:GCGGGTCGCCATCGTCCGGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:664
LEAP-Seq percent confirming:96.6863
LEAP-Seq n confirming:2626
LEAP-Seq n nonconfirming:90
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TGATCATGTGGGCACCTAAA
Suggested primer 2:CTTGGTAATGGAGTTGCCGT