Insertion junction: LMJ.RY0402.137696_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.137696
Chromosome:chromosome 3
Location:3226752
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g165500 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGGGGTGGCGTGCTAGGCGGGCCACGG
Internal bar code:GAGTGCAAGAGGCTTACGTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:578
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCCACATACACGTGCGTC
Suggested primer 2:GAAACGCTGCAAAGGAGTTC