Insertion junction: LMJ.RY0402.137780_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.137780
Chromosome:chromosome 9
Location:6644908
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g408676 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGGCATCTCAAGCCTTGTGGGCGGCAT
Internal bar code:GGCTGCTCGGCGGTTTAGGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:629
LEAP-Seq percent confirming:54.1793
LEAP-Seq n confirming:13262
LEAP-Seq n nonconfirming:11216
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCAGCTGTAGAAGGAGCC
Suggested primer 2:CACTGAGCTTCGAGCAACTG