Insertion junction: LMJ.RY0402.137839_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.137839
Chromosome:chromosome 13
Location:2392111
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g579550 CGL27 Conserved in the Green Lineage; (1 of 5) IPR002645 - STAS domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGATTAGGCCGAATTGAAGCTCGTAGCAC
Internal bar code:CGGGTGGCTCTTGCGGATCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:830
LEAP-Seq percent confirming:99.5584
LEAP-Seq n confirming:3607
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGCCTTCTAAAATCGACG
Suggested primer 2:GGTCACAGTCACCCTCCTGT