Insertion junction: LMJ.RY0402.137839_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.137839
Chromosome:chromosome 13
Location:2392111
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g579550 CGL27 Conserved in the Green Lineage; (1 of 5) IPR002645 - STAS domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCTTGCTTAAACCAAGCGACGGCCCCG
Internal bar code:CGTCGCATTCGAGTTACCGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:768
LEAP-Seq percent confirming:99.857
LEAP-Seq n confirming:5585
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGCCTTCTAAAATCGACG
Suggested primer 2:GGTCACAGTCACCCTCCTGT