Insertion junction: LMJ.RY0402.138048_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.138048
Chromosome:chromosome 17
Location:5398791
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g736700 (1 of 2) IPR011038 - Calycin-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCGGTGGGCGACTAGTTGCGTTGCTGTG
Internal bar code:CGTCGGTCCGATGGACTTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:674
LEAP-Seq percent confirming:99.3057
LEAP-Seq n confirming:6436
LEAP-Seq n nonconfirming:45
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TAAAGAGGCACAGCATGCAC
Suggested primer 2:GAAGAAGTAAGGCGACACGC