Insertion junction: LMJ.RY0402.138114_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.138114
Chromosome:scaffold 39
Location:21599
Confidence (%):58
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGCAACTAATGCCCTTTCAGCTCCCAAA
Internal bar code:TAAAAGAACGAGTAACGTTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:115
LEAP-Seq percent confirming:22.2222
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CATCCACTCACCATCCTGTG
Suggested primer 2:GTAGCCTTTGGAGGCTTGTG