Insertion junction: LMJ.RY0402.138186_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.138186
Chromosome:chromosome 16
Location:5661720
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g679250 ELI1,ELIP2,ELI2,ELIP1 Early light-induced LHC-like protein; (1 of 6) PTHR14154//PTHR14154:SF5 - UPF0041 BRAIN PROTEIN 44-RELATED // EARLY LIGHT-INDUCED PROTEIN 1, CHLOROPLASTIC-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGTCCACATCCTGCCTGGTAGTACCCCA
Internal bar code:AAATCGACCCGTGTGTGCACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:581
LEAP-Seq percent confirming:97.4732
LEAP-Seq n confirming:40851
LEAP-Seq n nonconfirming:1059
LEAP-Seq n unique pos:113

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAATGACGCTGGTGCTAC
Suggested primer 2:TTTCTCTACCTTCCCTCGCA