Insertion junction: LMJ.RY0402.138239_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.138239
Chromosome:chromosome 13
Location:1127177
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g569500 (1 of 3) PTHR10696 - GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED; Similar to conserved hypothetical protein in bacteria CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCAAGGTTCGGGAAGTCGGCCGCAACCC
Internal bar code:GACCGGCTCTGTCCGCACCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:712
LEAP-Seq percent confirming:99.6057
LEAP-Seq n confirming:11115
LEAP-Seq n nonconfirming:44
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCTCAATTTAAGGCAAAC
Suggested primer 2:AACAAACCCAGGTGGACAAG