Insertion junction: LMJ.RY0402.138246_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.138246
Chromosome:chromosome 9
Location:1829957
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g395950 AOX1 Alternative oxidase, mitochondrial; (1 of 2) PTHR31803//PTHR31803:SF3 - FAMILY NOT NAMED // ALTERNATIVE OXIDASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTCACAGCGGCTGTGAGAGGCTGAGGAT
Internal bar code:ACATAGAGAGTGTGTACATTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:874
LEAP-Seq percent confirming:99.5125
LEAP-Seq n confirming:4695
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCTTGACAGCCTCCTCCT
Suggested primer 2:TTCGTGCCTCTCTTCAGGTT