Insertion junction: LMJ.RY0402.138246_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.138246
Chromosome:chromosome 9
Location:1829969
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g395950 AOX1 Alternative oxidase, mitochondrial; (1 of 2) PTHR31803//PTHR31803:SF3 - FAMILY NOT NAMED // ALTERNATIVE OXIDASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTTCCATGCACCCCCAGGCTGGATCCAC
Internal bar code:GGCTGTTTCGTGTATACGGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:823
LEAP-Seq percent confirming:99.5157
LEAP-Seq n confirming:10274
LEAP-Seq n nonconfirming:50
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGTGCCTCTCTTCAGGTT
Suggested primer 2:TGTCTTGACAGCCTCCTCCT