Insertion junction: LMJ.RY0402.138268_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.138268
Chromosome:chromosome 10
Location:2106749
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g433350 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGGCCTGTGTAAGCGCGCGGCAGGTAGT
Internal bar code:TTATTGATAACGCTAAGTTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:126
LEAP-Seq percent confirming:99.0107
LEAP-Seq n confirming:2302
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAGCTATTCTTGCCAGTC
Suggested primer 2:CTGCCATATCCGGTAGCAGT