Insertion junction: LMJ.RY0402.138273_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.138273
Chromosome:chromosome 3
Location:6076867
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g191500 (1 of 2) PTHR11373:SF4 - DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE SAMHD1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTAGCACAGGGGTTAGCGTCCATCCCCGC
Internal bar code:ATAAACGACCGGCAAGTCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:185
LEAP-Seq percent confirming:89.9083
LEAP-Seq n confirming:98
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGTTTTGTGGGATGGTG
Suggested primer 2:TGCTGTACTTCATTCTGCCG