Insertion junction: LMJ.RY0402.138409_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.138409
Chromosome:chromosome 13
Location:2557575
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g580800 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCGCACCCAGCCTCCGCCACACGCGAGA
Internal bar code:CGACCGGTCTTCGCGAGATACC

Confirmation - LEAP-Seq

LEAP-Seq distance:392
LEAP-Seq percent confirming:84.9722
LEAP-Seq n confirming:2748
LEAP-Seq n nonconfirming:486
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CAAATCTCGCAATAGTCGCA
Suggested primer 2:AAAGAGCTGCTGTTGTGGGT