Insertion junction: LMJ.RY0402.138509_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.138509
Chromosome:chromosome 3
Location:8633642
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g203569 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAGTGTCATGCATGGGATGGGCCCTTTG
Internal bar code:CAGGTGTAGCCGTCACGAGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:300
LEAP-Seq percent confirming:61.8075
LEAP-Seq n confirming:10163
LEAP-Seq n nonconfirming:6280
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTTGCAAAAAGGCTGTGA
Suggested primer 2:GCTTGAGGTGACACACGCTA