Insertion junction: LMJ.RY0402.138600_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.138600
Chromosome:chromosome 9
Location:6516226
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g407550 (1 of 1) IPR000104//IPR003034 - Antifreeze protein, type I // SAP domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTAAAATGCCGGTGGCTGGCTTTGCAGT
Internal bar code:CTAACGTACGTGGGGGTCGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:498
LEAP-Seq percent confirming:60.1847
LEAP-Seq n confirming:7301
LEAP-Seq n nonconfirming:4830
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGTCCATGATATCCCAAA
Suggested primer 2:AGAGATGTCGTGCTCCCAAC