Insertion junction: LMJ.RY0402.138784_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.138784
Chromosome:chromosome 1
Location:4325847
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g029300 TPI1,TPIC1,TPIC (1 of 1) 5.3.1.1 - Triose-phosphate isomerase / Triosephosphate mutase; Triose phosphate isomerase, chloroplast precursor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATGTACTGCCTACCTACGTGGCCGGATG
Internal bar code:GGCGTAGGACACATGCTGGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1204
LEAP-Seq percent confirming:99.5736
LEAP-Seq n confirming:9808
LEAP-Seq n nonconfirming:42
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:AACTGCAAGGACCTCTCGAA
Suggested primer 2:TTGAGACACCTCACGCTGAC