Insertion junction: LMJ.RY0402.138790_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.138790
Chromosome:chromosome 2
Location:2811937
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre02.g094450 PHC38,PHC21 Pherophorin-chlamydomonas homolog 38; (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGCAGCAAGTGCGACCCCCGTCTGGCC
Internal bar code:ACATTACCCGATCGGGTAAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:753
LEAP-Seq percent confirming:99.8296
LEAP-Seq n confirming:4101
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCTACTCTATCCGTGCCGAG
Suggested primer 2:ATGCTCGCAGTGTACAGCAC