Insertion junction: LMJ.RY0402.138839_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.138839
Chromosome:chromosome 1
Location:4726109
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g032550 CGL127 (1 of 1) K11267 - sister chromatid cohesion protein PDS5 (PDS5); Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGATACGGTTTGCGCATGTAGTTGGCGAG
Internal bar code:TTCGGAAACCCTCGGGGCAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:910
LEAP-Seq percent confirming:99.7336
LEAP-Seq n confirming:5615
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGACTCCTCTATCATGCC
Suggested primer 2:TTCACGCAGCTGACCTTATG