Insertion junction: LMJ.RY0402.138884_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.138884
Chromosome:chromosome 12
Location:3335414
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g497653 SNE13,NED1 (1 of 8) PTHR10366//PTHR10366:SF411 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173 PROTEIN; Putative Cinnamoyl-CoA reductase/flavanone 4-reductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGTCAGCAGGCCGCACACAAATCGCGGA
Internal bar code:TTCTCGGTGCTACGACAACTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:896
LEAP-Seq percent confirming:99.3164
LEAP-Seq n confirming:7409
LEAP-Seq n nonconfirming:51
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGTTACTTGCAAGGCGAG
Suggested primer 2:CAAAACATGGTGTGCTGGAC