Insertion junction: LMJ.RY0402.138908_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.138908
Chromosome:chromosome 6
Location:1198474
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g257600 FA1 (1 of 4) PF13516 - Leucine Rich repeat (LRR_6); Flagellar Autonomy Protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCCACTCACATTGCCGCCGCAGTTGGAA
Internal bar code:ATACTGTCCCAGACGTAAATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:254
LEAP-Seq percent confirming:98.7234
LEAP-Seq n confirming:696
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GATCTGGCTGCTGTGTTTGA
Suggested primer 2:CTGCCATATGACACTGGTGC