Insertion junction: LMJ.RY0402.138994_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.138994
Chromosome:chromosome 16
Location:5948621
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g677001 (1 of 1) PTHR31596:SF1 - T-CELL ACTIVATION INHIBITOR, MITOCHONDRIAL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAAATATAGCGCAAAGACAGTGTGTGTG
Internal bar code:CGGGACATGCTCTGAACAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:766
LEAP-Seq percent confirming:90.9302
LEAP-Seq n confirming:11770
LEAP-Seq n nonconfirming:1174
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGTGTGTGTGTGTGTGT
Suggested primer 2:CATCACATGGTCACTCCTCG