Insertion junction: LMJ.RY0402.139044_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.139044
Chromosome:chromosome 12
Location:1957737
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g510400 RBD4,CPLD30 Conserved in the Plant Lineage and Diatoms; (1 of 4) IPR024934 - Rubredoxin-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGGGCCTTCCCGGACCGGCAAGGGATGT
Internal bar code:AGGTTTCTTTGGAAACTTCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1004
LEAP-Seq percent confirming:87.6823
LEAP-Seq n confirming:1082
LEAP-Seq n nonconfirming:152
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAAAACGGGTGCATACTT
Suggested primer 2:TGCTAAGCAAATTGGCAGTG