Insertion junction: LMJ.RY0402.139058_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.139058
Chromosome:chromosome 3
Location:5410561
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g184900 (1 of 1) IPR027417//IPR029060 - P-loop containing nucleoside triphosphate hydrolase // PIN domain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAGAGGTGCATACCAACACCCGAGCTG
Internal bar code:TCTCGACGGGTTTCGACCGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:454
LEAP-Seq percent confirming:89.0957
LEAP-Seq n confirming:9380
LEAP-Seq n nonconfirming:1148
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGTACACACCTTGTCCTT
Suggested primer 2:TCAATGCTACCCCTCTTGCT