Insertion junction: LMJ.RY0402.139108_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.139108
Chromosome:chromosome 5
Location:1961335
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g241638 (1 of 1) IPR000253//IPR002562//IPR012337 - Forkhead-associated (FHA) domain // 3'-5' exonuclease domain // Ribonuclease H-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGGTTGCGGGATTTGGAGTCGCCTCCGT
Internal bar code:GGGTTGGCTTGTGGCTTAAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:790
LEAP-Seq percent confirming:98.7259
LEAP-Seq n confirming:3487
LEAP-Seq n nonconfirming:45
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CACGCTGACATCGTTCAAGT
Suggested primer 2:GTCTCTGTCTGCGGTCTTCC