Insertion junction: LMJ.RY0402.139108_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.139108
Chromosome:chromosome 12
Location:289687
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g485550 (1 of 1) 4.1.3.4 - Hydroxymethylglutaryl-CoA lyase / HMG-CoA lyase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCCAGCCGCCATGACCTCCTGTGCTCAC
Internal bar code:GAGCGCTGAGGGTTCCCAGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:100
LEAP-Seq percent confirming:98.7901
LEAP-Seq n confirming:19107
LEAP-Seq n nonconfirming:234
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AATCGCGCTGTAAGGAGAAA
Suggested primer 2:GGAAGAAAGCAAAGCAGTGG