Insertion junction: LMJ.RY0402.139285_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.139285
Chromosome:chromosome 4
Location:2312012
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g220576 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACAACCTTCGTCCACATTGATTGCCCC
Internal bar code:GATTATAAGTGCGCATCGGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:516
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGTGTCCCAACTCACCTT
Suggested primer 2:CCCAACTCCTCACACCAACT