Insertion junction: LMJ.RY0402.139465_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.139465
Chromosome:chromosome 9
Location:7242454
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g412550 (1 of 3) IPR000104//IPR005069 - Antifreeze protein, type I // Nucleotide-diphospho-sugar transferase 5'UTR|CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAATAGCGCTGCTATTCGATGCATGTCGAT
Internal bar code:GTGGCTGTCCTAGACTAACACC

Confirmation - LEAP-Seq

LEAP-Seq distance:976
LEAP-Seq percent confirming:99.222
LEAP-Seq n confirming:1658
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTTAGGGTCTTTGCTGG
Suggested primer 2:CGCAGTCCACTCAACACAGT