Insertion junction: LMJ.RY0402.139502_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.139502
Chromosome:chromosome 11
Location:757870
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g467632 (1 of 1) IPR008979//IPR017853 - Galactose-binding domain-like // Glycoside hydrolase superfamily intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATGTGATAATCATATACCCATGTCCAC
Internal bar code:ACGCTGTGCCCGAAATGGCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:770
LEAP-Seq percent confirming:97.1999
LEAP-Seq n confirming:6422
LEAP-Seq n nonconfirming:185
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CTCATGCTTCTTTTCCTCCG
Suggested primer 2:CGCATGACTTGTCCATTTTG