Insertion junction: LMJ.RY0402.139554_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.139554
Chromosome:chromosome 13
Location:5189602
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g607900 CPLD68 Conserved in the Plant Lineage and Diatoms; (1 of 96) IPR019734 - Tetratricopeptide repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTCCTTCTGGGCTTTCCTTCCTATTACA
Internal bar code:TCCAGGCCCTCTTAGGCGCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1242
LEAP-Seq percent confirming:99.7256
LEAP-Seq n confirming:7995
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AGCATGTGACTCATTGCAGC
Suggested primer 2:GGAGGACGTATACAAGCCCA