Insertion junction: LMJ.RY0402.139719_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.139719
Chromosome:chromosome 9
Location:7764510
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g416300 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCGGGCTGCCGNGGTGGCGTGCGCCTGC
Internal bar code:CAACAGGCTCCCCGCGTGGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:327
LEAP-Seq percent confirming:72.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CATTCGGGGTAGAAAGCAAA
Suggested primer 2:AAGCGCTATTTCGGCTACAA