Insertion junction: LMJ.RY0402.139824_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.139824
Chromosome:chromosome 9
Location:2602671
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g390350 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGACCTGACACACGAGGGCCAGTATCTG
Internal bar code:TGTCCAGTCTACCTTTTCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1068
LEAP-Seq percent confirming:98.4265
LEAP-Seq n confirming:7006
LEAP-Seq n nonconfirming:112
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTCCTTTGCTGCTTCTTG
Suggested primer 2:TCTGACGTTGTCGATTGAGC