Insertion junction: LMJ.RY0402.140084_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.140084
Chromosome:chromosome 4
Location:1889228
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g217950 (1 of 1) PTHR24347//PTHR24349//PTHR24349:SF84 - SERINE/THREONINE-PROTEIN KINASE // SERINE/THREONINE-PROTEIN KINASE // CALCIUM-DEPENDENT PROTEIN KINASE 13 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCACACATGGCATCCCACGTGTGCGCTC
Internal bar code:GTCTGTGTGCTAGGAAGGCCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:462
LEAP-Seq percent confirming:98.8292
LEAP-Seq n confirming:6162
LEAP-Seq n nonconfirming:73
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCAACGGCATGAAATAA
Suggested primer 2:TAGCATCACCTGTGTGGCAT