Insertion junction: LMJ.RY0402.140171_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.140171
Chromosome:chromosome 11
Location:2726544
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre11.g477000 SNRK2D snRK1 family in Chlamydomonas, subgroup 2; (1 of 41) IPR000719//IPR011009 - Protein kinase domain // Protein kinase-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTGCTTCCACGCCCGGTGCCGGCGCATG
Internal bar code:ATGGGATGGGGCGGTACACGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:872
LEAP-Seq percent confirming:90.646
LEAP-Seq n confirming:33452
LEAP-Seq n nonconfirming:3452
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:GATAGCTTCGAGGCGAATTG
Suggested primer 2:TCTGGATTGCTTCTGCATTG