Insertion junction: LMJ.RY0402.140182_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.140182
Chromosome:chromosome 2
Location:3420467
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre02.g095111 VSR1 Vacuolar Sorting Receptor; (1 of 1) PTHR22765//PTHR22765:SF56 - RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING // VACUOLAR-SORTING RECEPTOR 5-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGGCTGGCGTCTTCGGGCACCTCTCCGG
Internal bar code:CCTAGGTAGACGTCGGGGCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:257
LEAP-Seq percent confirming:79.0535
LEAP-Seq n confirming:13413
LEAP-Seq n nonconfirming:3554
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GCACTTGTTCTCAAGAGGGC
Suggested primer 2:TGGCTACGCCTTCACTTCTT