Insertion junction: LMJ.RY0402.140406_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.140406
Chromosome:chromosome 6
Location:4932977
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g279500 CPL6 Conserved in the Plant Lineage; (1 of 1) PTHR15852:SF8 - CHAPERONE PROTEIN DNAJ-LIKE PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTCCTGACACGCCGCACTTCGTGCCACA
Internal bar code:GGCAATGGTGTTGGTTTCGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1168
LEAP-Seq percent confirming:99.6333
LEAP-Seq n confirming:26901
LEAP-Seq n nonconfirming:99
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCGCGCAGTATATCAAA
Suggested primer 2:GCACCGTACAAGCTACACGA