Insertion junction: LMJ.RY0402.140636_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.140636
Chromosome:chromosome 14
Location:379640
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre14.g610501 RAA14,SDR34 (1 of 2) IPR002347//IPR003560 - Glucose/ribitol dehydrogenase // 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; Short-chain dehydrogenase/reductase found in psaA trans-splicing complex 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACACGCGGGGAGGGGGGAAACCGCGCAG
Internal bar code:TGCGCCGCTTTGGTTAATTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:501
LEAP-Seq percent confirming:99.1916
LEAP-Seq n confirming:42947
LEAP-Seq n nonconfirming:350
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:CTAAGTCTCACTCGGCTGGG
Suggested primer 2:ATCAGCATTGGCTAGGGATG