Insertion junction: LMJ.RY0402.140743_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.140743
Chromosome:chromosome 1
Location:4730323
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g032600 HPAT1,CGL25 (1 of 14) PF14295 - PAN domain (PAN_4); Hydroxyproline O-arabinosyl transferase 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCACTCGCCGAACTTGCCGGGAGTGAACT
Internal bar code:GGGCCCGGGAGAGCCTCTGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:0
LEAP-Seq percent confirming:2.07469
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:236
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACCGTTACACATAGGCT
Suggested primer 2:AGGTGTGCCAGGGAATACTG