Insertion junction: LMJ.RY0402.140743_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.140743
Chromosome:chromosome 1
Location:4730975
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g032600 HPAT1,CGL25 (1 of 14) PF14295 - PAN domain (PAN_4); Hydroxyproline O-arabinosyl transferase 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGCCGCGCTAAGCCTATGTGTAACGGT
Internal bar code:AAGGTGCGTAAAGAGGATGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:90
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ACCACTGAGGCCATCAAATC
Suggested primer 2:GGATTACAAGCTCTCTGGCG