Insertion junction: LMJ.RY0402.140759_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.140759
Chromosome:chromosome 9
Location:4146249
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g393876 (1 of 3) 2.1.1.200 - tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase / TrMet(Xm32) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGCGCCAAAAGCAGGGCAGCCATACAGC
Internal bar code:ACATAAATGTCGCGGGTGCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:465
LEAP-Seq percent confirming:99.1936
LEAP-Seq n confirming:123
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCGTCGAGCTACACCTTC
Suggested primer 2:GCCTGCTGCAACATTACAAA