Insertion junction: LMJ.RY0402.140916_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.140916
Chromosome:chromosome 5
Location:3138557
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g239300 (1 of 85) IPR009057 - Homeodomain-like 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACACCGAGTGCAGGCTCCGGAGCAGCTCT
Internal bar code:ACCCTTCTGCGCGGGATGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:906
LEAP-Seq percent confirming:87.9518
LEAP-Seq n confirming:365
LEAP-Seq n nonconfirming:50
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TAATCCGTTCGACTTGGGAG
Suggested primer 2:GATGGCGTGGATTTTCTGAT