Insertion junction: LMJ.RY0402.141139_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.141139
Chromosome:chromosome 17
Location:2690359
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g717850 PHC8 (1 of 1) IPR003882//IPR024616//IPR027417 - Pistil-specific extensin-like protein // Pherophorin // P-loop containing nucleoside triphosphate hydrolase; Pherophorin-chlamydomonas homolog 8 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGCGTGCCGTACGCTTGCACACGTAGC
Internal bar code:GCCCCTCGAGGTCTGGCGGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:733
LEAP-Seq percent confirming:99.6158
LEAP-Seq n confirming:4408
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGAACCACACAAAGCCTC
Suggested primer 2:CCTTACAGTCTTTCTGCGGC