Insertion junction: LMJ.RY0402.141995_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.141995
Chromosome:chromosome 8
Location:573464
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre08.g359500 (1 of 1) 6.3.2.4 - D-alanine--D-alanine ligase / D-alanylalanine synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCAGCCTCAAGACACCGCCGCAACCGCA
Internal bar code:TGCCTACGGCCCGTCACGAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:590
LEAP-Seq percent confirming:99.661
LEAP-Seq n confirming:588
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TCCATGGACTACTGCTGCTG
Suggested primer 2:AACACGGAACGAGCTGAGAT