Insertion junction: LMJ.RY0402.141999_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.141999
Chromosome:chromosome 9
Location:6125672
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g405150 PUS1 RNA pseudouridine synthase; (1 of 2) PTHR11142//PTHR11142:SF0 - PSEUDOURIDYLATE SYNTHASE // TRNA PSEUDOURIDINE SYNTHASE-LIKE 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACCCAGGCACGCCACGCACCCTCCTCCG
Internal bar code:GCAACTGGATGGGCTTGGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:641
LEAP-Seq percent confirming:99.6658
LEAP-Seq n confirming:8051
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GATAATGATCCGTGCTCCGT
Suggested primer 2:CTACCTTGGTCTCGCCTCAG