Insertion junction: LMJ.RY0402.142234_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.142234
Chromosome:chromosome 13
Location:2407826
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g579598 SSS3B,SSS3 (1 of 2) PTHR12526//PTHR12526:SF341 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED; Soluble starch synthase III intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTCAACGCACACCGAACCTGAACCTGAA
Internal bar code:CTCCATGCATCAGGCACGCATC

Confirmation - LEAP-Seq

LEAP-Seq distance:349
LEAP-Seq percent confirming:99.613
LEAP-Seq n confirming:2574
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GGTAGCGACATGTTCCTGGT
Suggested primer 2:CTGTACGGCAGTTGCAGTGT