Insertion junction: LMJ.RY0402.142456_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.142456
Chromosome:chromosome 3
Location:4238977
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g174100 (1 of 1) IPR013122//IPR015928 - Polycystin cation channel, PKD1/PKD2 // Aconitase/3-isopropylmalate dehydratase, swivel CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGAGAAGATGTCGTCGGCCTCGCCGTGGG
Internal bar code:TCGTGGATCACTAACGCGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:273
LEAP-Seq percent confirming:54.4569
LEAP-Seq n confirming:727
LEAP-Seq n nonconfirming:608
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGTTGTGAAGGACGGTGT
Suggested primer 2:ACCCTTCGTTTCATGGACAG