Insertion junction: LMJ.RY0402.142906_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.142906
Chromosome:chromosome 13
Location:3329202
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g586650 FXL1 FixL-like PAS domain protein; (1 of 12) 2.7.13.3 - Histidine kinase / Protein kinase (histidine) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTTGCATTGCTCGGATGTGTCATGCACA
Internal bar code:TGGGATTGGTTATCTCACGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1334
LEAP-Seq percent confirming:99.5415
LEAP-Seq n confirming:14764
LEAP-Seq n nonconfirming:68
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCTGGTTGAAGTCGTCC
Suggested primer 2:GTACACCCGTTGATGTGCTG