Insertion junction: LMJ.RY0402.143037_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.143037
Chromosome:chromosome 8
Location:1429599
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre08.g364400 (1 of 6) IPR001471//IPR016177 - AP2/ERF domain // DNA-binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAAGTGGGTGGTGAAGGCGGAAGGAGGA
Internal bar code:GTCGCTCGGCACCACGGGGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:713
LEAP-Seq percent confirming:99.7056
LEAP-Seq n confirming:2371
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GTAAGTCCCCATCGCCTGTA
Suggested primer 2:CCTTTTGCTTGTGGGTGTTT