Insertion junction: LMJ.RY0402.143055_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.143055
Chromosome:chromosome 10
Location:5923958
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g462100 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAACGTCGATTGCGTGCCCTGTCGGGTTA
Internal bar code:CAAGGGGCAGAATGCGGAACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:944
LEAP-Seq percent confirming:99.6611
LEAP-Seq n confirming:18525
LEAP-Seq n nonconfirming:63
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTACTGCTGCTGGTGCTG
Suggested primer 2:TAGGGACCAGACCACTCAGG